Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807231.1_cds_XP_016494760.1_9142
CDS Infomation

[gene=LOC107813951] [db_xref=GeneID:107813951] [protein=putative pentatricopeptide repeat-containing protein At3g15930] [protein_id=XP_016494760.1] [location=763..2358] [gbkey=CDS]
Sequence

ATGTTGAACTATGGTTTTGTTCCTAATAATTATACATTCCCTTTTGTTGTTAAAGCTTTG
TCTAGGACTAAAGATTACCTTTTTGGTGAAGCCTTACATTGTTCAGTTATTAAATTTGGG
CATGTTTTGGACCTTCATATAGTAAATTCACTTTTACATATGTATGCAAGTTTTGGGTTG
TCTAATGAGATCATGATTATGTTTGATGAAATTCCTGAACCAGATATCGTTTCTTGGAAT
GTGATAATTGATGATCTTGGTCAAAATGGTTGTTTTTATGAGGTTCTTGATGCAGTCAAT
GAGATGGGTCGATACGGGGTTGAGCCTAACTCGGTTACACTTCTTGGACTTGTCTCGTCG
TGCTTGAAAACGGGGGATTTTGGTATAGGGAAGTTGATTCATTTGTATGTAATAAAGAAA
GGGATACACATTAGTGAGAATCTTGGAAATGGTTTGATTGATATGTATGCTAAATTTGGA
GATATGGAATCAGCTGACAAACTGTTCAATAGGATGCAAATGAAGACAGTGGTAACATGG
ACTTCACTACTTGTTGGTTTTATACAAAAAGGTGAACTACAAAAAGCTAGTGTAATTTTT
AATCATATGCCTAAGGATATTACTGCTTGGAATGTTATGCTTAATGGATATGCTGAGGCT
CGCGATATGAATTCAGCCGAAATGATCTTTAGAGCAATGCCAAATAGAGATTTGGTTTCT
TGGAACACTATGATTGGTGGCTATACTCAGAACAAGAAGTATATGAAATCCTTAGAGCTG
CTAAGAGAAATGCTTAGTTTCGGATTGAAACCTGATCGGATAACATTAGTGGCATTGTTC
TCAGTTTGTGGATACGCAGGTGTACTGCGTATTGGTGAAGCCGTTCATTCTTTCGTGGAG
AAACAGAACATAAAGGAGGAAGAAGTTGAGGTAGCCTTATTGGAAATGTATAGTAAGTGT
GGTGATCCTGAGAAAGCTCTTAGAGTATTTGAAACCATACCAAGAAAGTTGGTGTTAGCT
TGGACTAACATGATTGTAGGACTAGCAATGAACGGTCTTGCAAATGAAGCTCTAATGTTG
TTCAATAAAATGTGTGATGAGGGAATAAAGCCTAATGAGATAACATATTTAAGTGTTTTA
TGTGGTTGTAGTTATGCAGGTTTAGTAAAAGAAGGTAAATGGTTGTTCAATGCTATGAGT
CAAGTACATGGTATTACACCAAGATCTGAGCATTATGGTTGTATGGTTGATCTTCTTGGC
CGAGCCGGTTTGCTAAAGGAAGCAGAGATGTTTATTCAAGAAATGCCAGAAAAGGCTGAT
GCTGGAATCTGGGGTGCATTATTGGGAGCTTGTAGAATGCATGGTAAGGTTCAATTAGGT
GAAAAGATAGCCAAGATTGTTACTCAAATGGACCCTTATCATTCGGGTCGTTACATTCTT
CTCTCCAACATTTATGCTGCAGAAAATAGATGGATTGATGCTGAAAAAGTAAGGAAGAAG
ATGAAAAGTTCAGGTATACATAAAACTCCAGGCTTTAGCTTGGTTGAGATGAAAGGTGAA
ATGCACCAATTCATAGTAGGCAATCTTTCTCTATGA

Peptide Sequence

PEP ID

XP_016494760.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At3g15930 [Nicotiana tabacum]
Sequence

MLNYGFVPNNYTFPFVVKALSRTKDYLFGEALHCSVIKFGHVLDLHIVNSLLHMYASFGL
SNEIMIMFDEIPEPDIVSWNVIIDDLGQNGCFYEVLDAVNEMGRYGVEPNSVTLLGLVSS
CLKTGDFGIGKLIHLYVIKKGIHISENLGNGLIDMYAKFGDMESADKLFNRMQMKTVVTW
TSLLVGFIQKGELQKASVIFNHMPKDITAWNVMLNGYAEARDMNSAEMIFRAMPNRDLVS
WNTMIGGYTQNKKYMKSLELLREMLSFGLKPDRITLVALFSVCGYAGVLRIGEAVHSFVE
KQNIKEEEVEVALLEMYSKCGDPEKALRVFETIPRKLVLAWTNMIVGLAMNGLANEALML
FNKMCDEGIKPNEITYLSVLCGCSYAGLVKEGKWLFNAMSQVHGITPRSEHYGCMVDLLG
RAGLLKEAEMFIQEMPEKADAGIWGALLGACRMHGKVQLGEKIAKIVTQMDPYHSGRYIL
LSNIYAAENRWIDAEKVRKKMKSSGIHKTPGFSLVEMKGEMHQFIVGNLSL

Transcript Sequence

Gene sequence data has not been registered.